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An Integrated Bioinformatics Approach to Identify Network-Derived Hub Genes in Starving Zebrafish.
Mortazavi A, Ghaderi-Zefrehei M, Muhaghegh Dolatabady M, Golshan M, Nazari S, Sadr AS, Kadkhodaei S, Imumorin IG, Peters SO, Smith J. Mortazavi A, et al. Animals (Basel). 2022 Oct 10;12(19):2724. doi: 10.3390/ani12192724. Animals (Basel). 2022. PMID: 36230465 Free PMC article.
The present study was aimed at identifying causative hub genes within modules formed by co-expression and protein-protein interaction (PPI) networks, followed by Bayesian network (BN) construction in the liver transcriptome of starved zebrafish. To this end, the GSE11107 a …
The present study was aimed at identifying causative hub genes within modules formed by co-expression and protein-protein interaction (PPI) …
The establishment of a library screening method based on yeast two-hybrid system and its use to determine the potential interactions of liver proteins in ayu, Plecoglossus altivelis.
Shi YH, Chen J, Li CH, Yang HY, Lu XJ. Shi YH, et al. Fish Shellfish Immunol. 2011 Apr-May;30(4-5):1184-7. doi: 10.1016/j.fsi.2011.02.012. Epub 2011 Feb 23. Fish Shellfish Immunol. 2011. PMID: 21352921
A library to library screening method (LLS) was established based on yeast two-hybrid (YTH) system in this research, and applied to study the PPIs in ayu liver. In total, 23 out of 55 interaction pairs were found positive through phenotypic identification, with a positive …
A library to library screening method (LLS) was established based on yeast two-hybrid (YTH) system in this research, and applied to study th …
Gene expression profiling of human HBV- and/or HCV-associated hepatocellular carcinoma cells using expressed sequence tags.
Yoon SY, Kim JM, Oh JH, Jeon YJ, Lee DS, Kim JH, Choi JY, Ahn BM, Kim S, Yoo HS, Kim YS, Kim NS. Yoon SY, et al. Int J Oncol. 2006 Aug;29(2):315-27. Int J Oncol. 2006. PMID: 16820872
Liver cancer is one of the leading causes of cancer death worldwide. ...Genes were identified (n=120) as being either up- or down-regulated in human liver cancer cells. Among these, 14 genes (FTL, K-ALPHA1, LDHA, RPL4, ENO1, ANXA2, RPL9, RPL10, RPL13A, GNB2L1 …
Liver cancer is one of the leading causes of cancer death worldwide. ...Genes were identified (n=120) as being either up- or down-reg …
Polymeric immunoglobulin receptor (PIGR) exerts oncogenic functions via activating ribosome pathway in hepatocellular carcinoma.
Zhang Y, Zhang J, Chen X, Yang Z. Zhang Y, et al. Int J Med Sci. 2021 Jan 1;18(2):364-371. doi: 10.7150/ijms.49790. eCollection 2021. Int J Med Sci. 2021. PMID: 33390805 Free PMC article.
PIGR RNAseq revealed that ribosome signaling was the common pathway in PIGR overexpression and PIGR knockdown samples. RNAseq analysis indicated that RPL10, RPL10A, RPL12, RPL19, RPL36, RPL38, RPL41, RPL6, RPL8, RPS12, RPS14, RPS15A, RPS2, RPS27A and RPSA were significantl …
PIGR RNAseq revealed that ribosome signaling was the common pathway in PIGR overexpression and PIGR knockdown samples. RNAseq analysis indic …